Genetic variation in South African Diuraphis noxia biotypes

dc.contributor.advisorVisser, Botma
dc.contributor.advisorMohase, Lintle
dc.contributor.advisorJankielsohn, Astrid
dc.contributor.authorMinnaar, Evandre Annemari
dc.date.accessioned2021-08-02T10:16:39Z
dc.date.available2021-08-02T10:16:39Z
dc.date.issued2020
dc.date.updated2021-08-02
dc.description.abstractWheat (Triticum aestivum L.) is an important winter and spring crop in South Africa with average dryland yields of 2.5 t/ha, while irrigated wheat yields 5 t/ha. Diuraphis noxia (Kurdjumov) commonly referred to as the Russian wheat aphid was recorded in 1978 to South Africa and has become a major pest in the wheat industry. It can cause over 80% yield loss in the summer rainfall region if not controlled. There are five described RWA biotypes in SA, namely RWASA1 to RWASA5. We investigated the genetic variation of 24 specimens which are representative of four South African RWA biotypes using three molecular techniques, AFLP, cDNA-AFLP and microsatellites. With AFLP and cDNA-AFLP, we detected variation among specimens within a biotype. The cDNA-AFLP results increased the amount of the variation detected compared to the genomic AFLP results, but it was not sufficient to be linked to a specific biotype. With microsatellites, we were able to detect variation among biotypes and distinguish between them. We were unable to identify markers unique to a biotype. We found evidence that the genetic diversity may be linked to geographic location of the RWA, but further investigation is required to confirm this.en_ZA
dc.description.sponsorshipAgricultural Research Council-Small Grainen_ZA
dc.description.sponsorshipNational Research Foundation (NRF)en_ZA
dc.identifier.urihttp://hdl.handle.net/11660/11242
dc.language.isoenen_ZA
dc.publisherUniversity of the Free Stateen_ZA
dc.rights.holderUniversity of the Free Stateen_ZA
dc.subjectDissertation (M.Sc. Botany (Plant Sciences))--University of the Free State, 2020en_ZA
dc.subjectDiuraphis noxiaen_ZA
dc.subjectAFLPen_ZA
dc.subjectcDNA-AFLPen_ZA
dc.subjectMicrosatellitesen_ZA
dc.subjectSouth Africaen_ZA
dc.subjectGenetic variation - South Africaen_ZA
dc.subjectWheat - Disease and pest resistanceen_ZA
dc.subjectRussian wheat aphiden_ZA
dc.titleGenetic variation in South African Diuraphis noxia biotypesen_ZA
dc.typeDissertationen_ZA

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